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@rendeirolab

Rendeiro Lab

Research group working on computational and molecular methods to study human aging and pathology

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  1. rendeirolab.github.io rendeirolab.github.io Public

    A simple static website for the Rendeiro lab

    Python

  2. lab-manual lab-manual Public

    The Rendeiro lab manual

    Shell 1 1

  3. LazySlide LazySlide Public

    Accessible and interoperable whole slide image analysis

    Python 325 32

  4. wsidata wsidata Public

    Efficient data structures and IO for whole slide image analysis

    Python 33 6

  5. wsi wsi Public

    A Python package for the processing of whole slide histopathological images

    Python 6

  6. _project_template _project_template Public template

    A cookiecutter template for projects in the Rendeiro lab

    Python 1

Repositories

Showing 10 of 24 repositories
  • lab-manual Public

    The Rendeiro lab manual

    rendeirolab/lab-manual's past year of commit activity
    Shell 1 1 0 1 Updated Sep 27, 2026
  • rendeirolab.github.io Public

    A simple static website for the Rendeiro lab

    rendeirolab/rendeirolab.github.io's past year of commit activity
    Python 0 0 0 0 Updated Sep 15, 2026
  • minibatch-dp-means Public

    Fast mini-batch DP-Means clustering with a C++ backend

    rendeirolab/minibatch-dp-means's past year of commit activity
    Python 0 0 0 0 Updated Sep 15, 2026
  • lazyslide-models Public

    The model zoo for LazySlide

    rendeirolab/lazyslide-models's past year of commit activity
    Python 3 MIT 2 2 1 Updated Sep 5, 2026
  • LazySlide Public

    Accessible and interoperable whole slide image analysis

    rendeirolab/LazySlide's past year of commit activity
    Python 325 MIT 32 12 2 Updated Aug 30, 2026
  • wsidata Public

    Efficient data structures and IO for whole slide image analysis

    rendeirolab/wsidata's past year of commit activity
    Python 33 MIT 6 6 (1 issue needs help) 0 Updated Aug 29, 2026
  • macsima-pipeline Public

    A python based preprocessing SLURM pipeline for MACSima data

    rendeirolab/macsima-pipeline's past year of commit activity
    Python 0 MIT 0 0 0 Updated Aug 13, 2026
  • metpredict-website Public
    rendeirolab/metpredict-website's past year of commit activity
    HTML 0 1 0 0 Updated Aug 12, 2026
  • stainx Public

    Enhanced stain normalization for histopathology images with batch processing support. Optimized for CPU, GPU (CUDA), and MPS (Apple Silicon) devices.

    rendeirolab/stainx's past year of commit activity
    Python 25 0 5 0 Updated Aug 9, 2026
  • tissue-clocks Public

    Histopathology of human aging to predict biological age and disease

    rendeirolab/tissue-clocks's past year of commit activity
    HTML 7 0 0 0 Updated Jul 29, 2026
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