Issues

• Mean coverage of e1-e3

  ratschlab/spladder#208 · Filter by author KonstantinTyurin opened on Sep 26, 2025

• ValueError & AssertionError when calling events per event type

  ratschlab/spladder#207 · Filter by author nhansen22 opened on May 2, 2025

• AttributeError: Can't pickle local object 'detect_events.<locals>.<lambda>'

  ratschlab/spladder#205 · Filter by author maronem opened on Jan 27, 2025

• spladder test yields IndexError: index 0 is out of bounds for axis 0 with size 0

  ratschlab/spladder#201 · Filter by author careenfoord opened on Sep 9, 2024
  1

• Save space at merge step

  ratschlab/spladder#200 · Filter by author zyh4482 opened on Jul 29, 2024
  6

• Computation time

  ratschlab/spladder#198 · Filter by author Elisa89m opened on Jun 11, 2024
  1

• local variable 'genes2' referenced before assignment

  ratschlab/spladder#196 · Filter by author ls233 opened on Apr 1, 2024
  4

• How to estimate PSI of a new input sample on pre-called events

  ratschlab/spladder#194 · Filter by author sckinta opened on Dec 20, 2023
  1

• Execution fails with --psi-min-reads set to specific value

  ratschlab/spladder#190 · Filter by author lea-lenhardtackovic opened on Aug 30, 2023
  1

• Spladder viz issue: PDF dimensions out of allowed range

  ratschlab/spladder#189 · Filter by author balbachs opened on Aug 1, 2023

• Interpretation of the differential splicing testing results

  ratschlab/spladder#187 · Filter by author Sneha-Sur opened on Jun 7, 2023

• Naming of skipped exons in mutually exclusive events is based on exon length not genomic coordinates

  ratschlab/spladder#186 · Filter by author R-Najjar opened on Mar 22, 2023

• viz issue

  ratschlab/spladder#185 · Filter by author TracyKoubkovaYu opened on Mar 9, 2023

• gff on gtf

  ratschlab/spladder#184 · Filter by author ntsopoul opened on Feb 10, 2023
  1

• About Image output

  ratschlab/spladder#183 · Filter by author avrajit opened on Feb 10, 2023
  2

• RuntimeWarning: invalid value encountered in subtract

  ratschlab/spladder#179 · Filter by author kate-stankiewicz opened on Dec 2, 2022
  2

• Use on large cohorts

  ratschlab/spladder#176 · Filter by author andrepessoni opened on Oct 18, 2022
  6

• Test Mode ValueError

  ratschlab/spladder#175 · Filter by author JP971 opened on Oct 7, 2022
  1

• viz mode issue

  ratschlab/spladder#173 · Filter by author selmanurk opened on Aug 27, 2022
  1

• ValueError: NaN, inf or invalid value detected in endog, estimation infeasible

  ratschlab/spladder#172 · Filter by author lisagrigoreva opened on Aug 24, 2022
  2

• Index Error during build step

  ratschlab/spladder#171 · Filter by author kethselly opened on Aug 15, 2022
  2

• at which stage can i select the confidence threshold?

  ratschlab/spladder#170 · Filter by author ArashDepp opened on Aug 10, 2022

• llvmlite.binding' has no attribute 'get_host_cpu_name

  ratschlab/spladder#169 · Filter by author ArashDepp opened on Aug 1, 2022
  3

• Testing mode fails despite using the default merging strategy

  ratschlab/spladder#166 · Filter by author shepp-hub opened on May 19, 2022
  2

• Spladder test stuck

  ratschlab/spladder#160 · Filter by author zyh4482 opened on Mar 17, 2022
  2