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iqtree

22 followers
Canberra, Australia
http://iqtree.github.io/

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iqtree3 iqtree3 Public

IQ-TREE version 3: software for phylogenetics

C++ 168 45

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Showing 10 of 11 repositories

piqtree Public
A Python library that exposes features from IQ-TREE - efficient software for phylogenomic inference

iqtree/piqtree's past year of commit activity

Python 51 GPL-2.0 9 1 2 Updated Oct 5, 2026
iqtree3 Public
IQ-TREE version 3: software for phylogenetics

iqtree/iqtree3's past year of commit activity

C++ 168 GPL-2.0 45 62 8 Updated Oct 3, 2026
iqtree.github.io Public
IQ-TREE main website

iqtree/iqtree.github.io's past year of commit activity

CSS 2 12 0 5 Updated Sep 14, 2026
iqtree2 Public
IQ-TREE software version 2: phylogenetics by maximum likelihood

iqtree/iqtree2's past year of commit activity

C++ 336 GPL-2.0 72 113 5 Updated Jul 22, 2026
calibratree Public
Fossil calibation annotation for Bayesian molecular dating 🧬

iqtree/calibratree's past year of commit activity

Jupyter Notebook 3 GPL-3.0 0 1 0 Updated Jul 13, 2026
cmaple Public
MAximum Parsimonious Likelihood Estimation in C/C++

iqtree/cmaple's past year of commit activity

C 12 GPL-2.0 4 6 1 Updated May 1, 2026
VBayes Public
Variational time tree inference with Graph Neural Networks

iqtree/VBayes's past year of commit activity

Python 1 GPL-2.0 0 0 0 Updated Nov 24, 2025
paml Public

iqtree/paml's past year of commit activity

C 5 GPL-3.0 1 2 0 Updated May 23, 2025
decenttree Public
Fast Neighbor-Joining and other distance-based methods for phylogenetics

iqtree/decenttree's past year of commit activity

C++ 17 GPL-2.0 9 5 4 Updated Jun 21, 2024
cmaple_api Public
A Demo of CMaple API documentation

iqtree/cmaple_api's past year of commit activity

0 0 0 0 Updated May 14, 2024

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