GitHub - bibymaths/KinOpt: Optimization-based estimation of cumulative kinase effects on substrate phosphorylation, including the effects of kinase autophosphorylation on its own activity. · GitHub

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KinOpt

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Optimization-based estimation of cumulative kinase effects on substrate phosphorylation, including the effects of kinase autophosphorylation on its own activity.

bibymaths.github.io/KinOpt/

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Name		Name	Last commit message	Last commit date
.github		.github
app		app
config		config
docs		docs
kinopt		kinopt
notebooks		notebooks
processing		processing
scripts		scripts
.gitignore		.gitignore
AGENTS.md		AGENTS.md
CITATION.cff		CITATION.cff
Dockerfile		Dockerfile
README.md		README.md
SECURITY.md		SECURITY.md
TERMS_OF_USE.md		TERMS_OF_USE.md
cliff.toml		cliff.toml
config.toml		config.toml
config_loader.py		config_loader.py
mkdocs.yml		mkdocs.yml
pixi.lock		pixi.lock
pixi.toml		pixi.toml
pytest.ini		pytest.ini

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KinOpt is a modular framework designed for the analysis and optimization of gene–phosphorylation time-series data.

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Optimization-based estimation of cumulative kinase effects on substrate phosphorylation, including the effects of kinase autophosphorylation on its own activity.

bibymaths.github.io/KinOpt/

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