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@CDCgov

Centers for Disease Control and Prevention

CDC's collaborative software projects to protect America from health, safety, and security threats, both foreign and in the U.S. No PII or PHI permitted
README.md

CDCGov Organization

This is CDC's GitHub organization for collaborating on open source projects. More information on CDC's open collaboration projects is available at openCDC.

Check out our Open Source Practices and please suggest any ideas for improvement by sending a pull request.

Check out a portal of all the projects hosted in the CDCGov domain.

If you would like to create a new project, please fill out an issue on https://github.com/cdcgov/template logging in with your CDC credentials.

If you would like to join the CDCGov organization, or would like to suggest some others to join, please drop an issue into the template repo.

No PII/PHI permitted for hosting in this environment.

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  1. cdcgov.github.io cdcgov.github.io Public

    Portal site for all CDCgov projects, https://cdcgov.github.io

    HTML 25 35

  2. template template Public template

    Template repository with rules, practices, and privacy, license, records notices to help people use the CDCgov GitHub organization.

    41 50

Repositories

Showing 10 of 573 repositories
  • prime-fhir-converter Public

    The CDC’s Pandemic-Ready Interoperability Modernization Effort (PRIME) Java based FHIR conversion library

    CDCgov/prime-fhir-converter's past year of commit activity
    Kotlin 14 Apache-2.0 6 2 0 Updated Sep 22, 2026
  • rsv-forecast-hub Public

    A repository run by the Centers for Disease Control and Prevention (CDC) to collect forecasts of incident respiratory syncytial virus (RSV) hospital admissions and emergency department visits.

    CDCgov/rsv-forecast-hub's past year of commit activity
    6 Apache-2.0 17 9 3 Updated Sep 22, 2026
  • cfa-forecast-hub-reports Public

    The staging place for data that facilitates the public-facing forecast visualizations at CDC.

    CDCgov/cfa-forecast-hub-reports's past year of commit activity
    1 Apache-2.0 2 3 3 Updated Sep 22, 2026
  • covid19-forecast-hub Public

    A repository run by the Centers for Disease Control and Prevention (CDC) to collect forecasts of incident respiratory COVID-19 hospital admissions and emergency department visits.

    CDCgov/covid19-forecast-hub's past year of commit activity
    28 Apache-2.0 40 11 4 Updated Sep 22, 2026
  • ocio-wsl Public

    This repository build images for Windows Subsystem Linux (WSL2) for CDC developers.

    CDCgov/ocio-wsl's past year of commit activity
    Shell 4 MIT 0 2 0 Updated Sep 22, 2026
  • hubhelpr Public

    R package providing helper functions for CDC forecast hub maintenance and report generation.

    CDCgov/hubhelpr's past year of commit activity
    R 3 Apache-2.0 0 21 5 Updated Sep 22, 2026
  • AlgebraicEpiModels Public
    CDCgov/AlgebraicEpiModels's past year of commit activity
    Julia 0 Apache-2.0 0 0 0 Updated Sep 22, 2026
  • phylophoenix Public

    🔥🌿🐦🔥PhyloPHoeNIx: Pipeline for relatedness determination using PHoeNIx output.

    CDCgov/phylophoenix's past year of commit activity
    Python 12 Apache-2.0 1 6 1 Updated Sep 22, 2026
  • stimulant_opioid_algorithm_medical_codes_R Public
    CDCgov/stimulant_opioid_algorithm_medical_codes_R's past year of commit activity
    HTML 4 Apache-2.0 3 0 0 Updated Sep 22, 2026
  • Opioid_SUD_MHI_MedCodes Public

    Code to flag ICD-10-CM codes related to opioid involvement, substance use disorder, and mental health issues in structured hospital data

    CDCgov/Opioid_SUD_MHI_MedCodes's past year of commit activity
    Python 8 8 0 0 Updated Sep 22, 2026
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