Issues

• KeyError with create_splice_sites with database derived from GTF file

  daler/gffutils#239 · Filter by author kbseah opened on May 23, 2025
  1

• Value of Target attribute gains quotes when it shouldn't in round trip manipulation

  feature request
  daler/gffutils#230 · Filter by author photocyte opened on Apr 5, 2024
  4

• merge_strategy='create_unique' not always creating unique id's

  needs-discussion
  daler/gffutils#214 · Filter by author novigit opened on Apr 25, 2023
  2

• db.parents(id) stops at level 2?

  daler/gffutils#204 · Filter by author dariober opened on Jan 12, 2023

• Map transcript coordinates to genome coordinates

  feature request
  daler/gffutils#203 · Filter by author dariober opened on Jan 5, 2023
  4

• Support for fasta at end

  daler/gffutils#127 · Filter by author innovate-invent opened on Apr 26, 2019

• spliced sequence extraction

  feature request
  daler/gffutils#103 · Filter by author daler opened on Oct 11, 2017
  2

• improve gffwriter

  feature request
  daler/gffutils#89 · Filter by author daler opened on Sep 21, 2016
  1

• Graph database?

  discussion
  daler/gffutils#35 · Filter by author olgabot opened on May 10, 2014
  5

• Lightweight Gene class for gffutils

  feature request
  daler/gffutils#21 · Filter by author yarden opened on May 19, 2013
  1

• remove orphans

  feature request
  daler/gffutils#6 · Filter by author daler opened on Feb 25, 2013

• Add adapter to convert to Bio.SeqRecord

  feature request
  daler/gffutils#3 · Filter by author daler opened on Feb 21, 2013

• Command-line interface for gffutils

  design
  daler/gffutils#2 · Filter by author daler opened on Feb 20, 2013
  7