Issues

• secapr clean_reads and secapr assemble_reads stall

  AntonelliLab/seqcap_processor#41 · Filter by author faustovrz opened on Apr 2, 2025

• locus_selection

  AntonelliLab/seqcap_processor#39 · Filter by author pabijanM opened on Mar 12, 2024
  2

• --min-coverage in find_target_contigs

  AntonelliLab/seqcap_processor#38 · Filter by author pabijanM opened on Nov 11, 2023
  1

• Problem with loci alignments

  AntonelliLab/seqcap_processor#35 · Filter by author PierreHenriFabre opened on Jan 9, 2023
  5

• FileExistsError: [Errno 17] File exists: '/home/gmeng/work/4.assembly/secapr/April-5-2022/stats'

  AntonelliLab/seqcap_processor#27 · Filter by author linzhi2013 opened on Apr 5, 2022

• ValueError: No objects to concatenate

  AntonelliLab/seqcap_processor#26 · Filter by author linzhi2013 opened on Apr 5, 2022

• Paralogs_to_ref

  AntonelliLab/seqcap_processor#25 · Filter by author EdBiff opened on Mar 22, 2022

• GC overhead limit exceeded

  AntonelliLab/seqcap_processor#24 · Filter by author MikeSanJose opened on Mar 17, 2022
  2

• Division by zero error on aDNA dataset

  AntonelliLab/seqcap_processor#23 · Filter by author ThibauldMichel opened on May 9, 2021

• KeyError in locus_selection.py

  AntonelliLab/seqcap_processor#22 · Filter by author ThibauldMichel opened on May 4, 2021

• --disable_stats missing?

  AntonelliLab/seqcap_processor#20 · Filter by author BenKuhnhaeuser opened on Nov 5, 2020
  4

• Good loci lost during phasing

  AntonelliLab/seqcap_processor#17 · Filter by author brunoasm opened on Oct 16, 2019

• Error with add_missing_sequences

  AntonelliLab/seqcap_processor#16 · Filter by author brunoasm opened on Oct 14, 2019

• Speeding up find_target_contigs using parallelLastz

  AntonelliLab/seqcap_processor#11 · Filter by author RandolphQuek opened on Aug 7, 2018